Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HERC4Q5GLZ8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.49■□□□□ 0.87
HERC4Q5GLZ8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HERC4Q5GLZ8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 AC116407.4-201ENST00000623319 1061 ntBASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HERC4Q5GLZ8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms