Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AKR1C7P-201ENST00000305623 895 ntBASIC23.38■■□□□ 1.33
EIF4A1P60842 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EIF4A1P60842 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.38■■□□□ 1.33
EIF4A1P60842 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
EIF4A1P60842 FDX1P1-201ENST00000449115 551 ntBASIC23.38■■□□□ 1.33
EIF4A1P60842 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.38■■□□□ 1.33
EIF4A1P60842 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC23.38■■□□□ 1.33
EIF4A1P60842 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.38■■□□□ 1.33
EIF4A1P60842 AL031008.1-201ENST00000619963 541 ntBASIC23.38■■□□□ 1.33
EIF4A1P60842 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EIF4A1P60842 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.38■■□□□ 1.33
EIF4A1P60842 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EIF4A1P60842 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EIF4A1P60842 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EIF4A1P60842 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
EIF4A1P60842 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.38■■□□□ 1.33
EIF4A1P60842 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.37■■□□□ 1.33
EIF4A1P60842 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.37■■□□□ 1.33
EIF4A1P60842 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.37■■□□□ 1.33
EIF4A1P60842 MTCL1P1-201ENST00000446207 792 ntBASIC23.37■■□□□ 1.33
EIF4A1P60842 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 AC079781.3-201ENST00000449110 356 ntBASIC23.37■■□□□ 1.33
EIF4A1P60842 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.37■■□□□ 1.33
EIF4A1P60842 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.37■■□□□ 1.33
EIF4A1P60842 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EIF4A1P60842 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.37■■□□□ 1.33
EIF4A1P60842 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.36■■□□□ 1.33
EIF4A1P60842 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.36■■□□□ 1.33
EIF4A1P60842 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.36■■□□□ 1.33
EIF4A1P60842 KRT16P4-201ENST00000453883 522 ntBASIC23.36■■□□□ 1.33
EIF4A1P60842 MINOS1P3-201ENST00000457048 203 ntBASIC23.36■■□□□ 1.33
EIF4A1P60842 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.36■■□□□ 1.33
EIF4A1P60842 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
EIF4A1P60842 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.36■■□□□ 1.33
EIF4A1P60842 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.36■■□□□ 1.33
EIF4A1P60842 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
EIF4A1P60842 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
EIF4A1P60842 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.36■■□□□ 1.33
EIF4A1P60842 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.36■■□□□ 1.33
EIF4A1P60842 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EIF4A1P60842 GMCL1P1-201ENST00000463439 1581 ntBASIC23.35■■□□□ 1.33
EIF4A1P60842 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.35■■□□□ 1.33
EIF4A1P60842 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 ESPNP-201ENST00000270691 2015 ntBASIC23.35■■□□□ 1.33
EIF4A1P60842 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.35■■□□□ 1.33
EIF4A1P60842 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 NUS1P2-201ENST00000417358 873 ntBASIC23.35■■□□□ 1.33
EIF4A1P60842 POM121L3P-201ENST00000419331 1163 ntBASIC23.35■■□□□ 1.33
EIF4A1P60842 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC23.35■■□□□ 1.33
EIF4A1P60842 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.35■■□□□ 1.33
EIF4A1P60842 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC23.35■■□□□ 1.33
EIF4A1P60842 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.35■■□□□ 1.33
EIF4A1P60842 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EIF4A1P60842 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.34■■□□□ 1.33
EIF4A1P60842 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EIF4A1P60842 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms