Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 FLJ16779-201ENST00000612722 7638 ntBASIC14.27□□□□□ -0.13
ERVFC1-1P60608 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ERVFC1-1P60608 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 AL162412.1-201ENST00000567129 965 ntBASIC14.26□□□□□ -0.13
ERVFC1-1P60608 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERVFC1-1P60608 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 AC026185.1-201ENST00000445748 174 ntBASIC14.25□□□□□ -0.13
ERVFC1-1P60608 AC006970.2-201ENST00000450065 779 ntBASIC14.25□□□□□ -0.13
ERVFC1-1P60608 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 AC016405.3-201ENST00000607710 860 ntBASIC14.25□□□□□ -0.13
ERVFC1-1P60608 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 FLJ38576-201ENST00000623820 2459 ntBASIC14.25□□□□□ -0.13
ERVFC1-1P60608 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERVFC1-1P60608 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms