Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDH4P55283 AL390719.2-201ENST00000606993 987 ntBASIC18.73■□□□□ 0.59
CDH4P55283 AL121672.3-201ENST00000608644 468 ntBASIC18.73■□□□□ 0.59
CDH4P55283 AC069148.1-201ENST00000608741 768 ntBASIC18.73■□□□□ 0.59
CDH4P55283 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CDH4P55283 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH4P55283 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH4P55283 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
CDH4P55283 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 BX276092.5-203ENST00000456199 560 ntBASIC18.72■□□□□ 0.59
CDH4P55283 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CDH4P55283 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDH4P55283 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDH4P55283 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.71■□□□□ 0.59
CDH4P55283 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.71■□□□□ 0.59
CDH4P55283 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CDH4P55283 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH4P55283 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CDH4P55283 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.71■□□□□ 0.59
CDH4P55283 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 ESPNP-201ENST00000270691 2015 ntBASIC18.71■□□□□ 0.59
CDH4P55283 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDH4P55283 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH4P55283 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CDH4P55283 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH4P55283 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.7■□□□□ 0.58
CDH4P55283 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH4P55283 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH4P55283 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH4P55283 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.7■□□□□ 0.58
CDH4P55283 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH4P55283 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.7■□□□□ 0.58
CDH4P55283 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.7■□□□□ 0.58
CDH4P55283 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDH4P55283 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDH4P55283 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDH4P55283 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms