Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.41■□□□□ 0.38
NR1H2P55055 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 RPS2P55-201ENST00000397318 883 ntBASIC17.41■□□□□ 0.38
NR1H2P55055 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.41■□□□□ 0.38
NR1H2P55055 ECEL1P3-201ENST00000427961 737 ntBASIC17.41■□□□□ 0.38
NR1H2P55055 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 AC107956.1-201ENST00000494359 873 ntBASIC17.41■□□□□ 0.38
NR1H2P55055 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.41■□□□□ 0.38
NR1H2P55055 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 NKILA-202ENST00000614771 2598 ntBASIC17.41■□□□□ 0.38
NR1H2P55055 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 KRT17P2-201ENST00000300992 1314 ntBASIC17.41■□□□□ 0.38
NR1H2P55055 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NR1H2P55055 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
NR1H2P55055 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NR1H2P55055 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 PKD1P1-201ENST00000458669 6805 ntBASIC17.4■□□□□ 0.38
NR1H2P55055 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H2P55055 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
NR1H2P55055 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 AL121829.2-201ENST00000620908 328 ntBASIC17.4■□□□□ 0.38
NR1H2P55055 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H2P55055 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.4■□□□□ 0.38
NR1H2P55055 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NR1H2P55055 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
NR1H2P55055 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NR1H2P55055 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
NR1H2P55055 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H2P55055 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H2P55055 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
NR1H2P55055 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.39■□□□□ 0.38
NR1H2P55055 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NR1H2P55055 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H2P55055 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NR1H2P55055 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 AC011676.5-201ENST00000624864 2660 ntBASIC17.39■□□□□ 0.37
NR1H2P55055 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.39■□□□□ 0.37
NR1H2P55055 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 HLA-G-202ENST00000376815 851 ntBASIC17.39■□□□□ 0.37
NR1H2P55055 HLA-G-203ENST00000376818 1127 ntBASIC17.39■□□□□ 0.37
NR1H2P55055 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NR1H2P55055 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NR1H2P55055 RARRES2P10-201ENST00000564312 460 ntBASIC17.39■□□□□ 0.37
NR1H2P55055 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.39■□□□□ 0.37
NR1H2P55055 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NR1H2P55055 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.39■□□□□ 0.37
NR1H2P55055 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.39■□□□□ 0.37
NR1H2P55055 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NR1H2P55055 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.39■□□□□ 0.37
NR1H2P55055 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms