Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF140P52738 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF140P52738 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF140P52738 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF140P52738 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF140P52738 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ZNF140P52738 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
ZNF140P52738 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF140P52738 REXO1L9P-201ENST00000604264 2108 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 NOC2LP1-202ENST00000452600 2235 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.25■□□□□ 0.51
ZNF140P52738 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 AC093010.1-201ENST00000473625 1624 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 AK4P3-201ENST00000418260 669 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 TSPY5P-201ENST00000426936 936 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 AC104076.2-201ENST00000448912 469 ntBASIC18.25■□□□□ 0.51
ZNF140P52738 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF140P52738 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF140P52738 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF140P52738 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.25■□□□□ 0.51
ZNF140P52738 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.25■□□□□ 0.51
ZNF140P52738 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ZNF140P52738 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ZNF140P52738 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ZNF140P52738 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF140P52738 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ZNF140P52738 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF140P52738 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF140P52738 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF140P52738 KRT18P38-201ENST00000449496 1282 ntBASIC18.24■□□□□ 0.51
ZNF140P52738 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.24■□□□□ 0.51
ZNF140P52738 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF140P52738 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
ZNF140P52738 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.24■□□□□ 0.51
ZNF140P52738 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ZNF140P52738 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.24■□□□□ 0.51
ZNF140P52738 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ZNF140P52738 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF140P52738 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF140P52738 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.23■□□□□ 0.51
ZNF140P52738 AL136038.4-201ENST00000603606 1261 ntBASIC18.23■□□□□ 0.51
ZNF140P52738 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.23■□□□□ 0.51
ZNF140P52738 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZNF140P52738 AL391807.1-203ENST00000604392 2365 ntBASIC18.23■□□□□ 0.51
ZNF140P52738 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZNF140P52738 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
ZNF140P52738 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.22■□□□□ 0.51
ZNF140P52738 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms