Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAB5AP20339 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB5AP20339 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB5AP20339 AC126544.1-201ENST00000580842 1059 ntBASIC14.28□□□□□ -0.12
RAB5AP20339 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.28□□□□□ -0.12
RAB5AP20339 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB5AP20339 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAB5AP20339 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAB5AP20339 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAB5AP20339 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5AP20339 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.27□□□□□ -0.12
RAB5AP20339 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RAB5AP20339 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB5AP20339 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB5AP20339 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB5AP20339 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 AC133561.4-201ENST00000566112 224 ntBASIC14.27□□□□□ -0.13
RAB5AP20339 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RAB5AP20339 AC120498.10-201ENST00000621827 505 ntBASIC14.27□□□□□ -0.13
RAB5AP20339 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 AC007950.2-201ENST00000615045 2347 ntBASIC14.27□□□□□ -0.13
RAB5AP20339 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
RAB5AP20339 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
RAB5AP20339 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB5AP20339 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB5AP20339 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB5AP20339 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB5AP20339 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.26□□□□□ -0.13
RAB5AP20339 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
RAB5AP20339 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB5AP20339 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms