Protein–RNA interactions for Protein: P13646

KRT13, Keratin, type I cytoskeletal 13, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT13P13646 NEK4P2-201ENST00000580004 1012 ntBASIC20.08■□□□□ 0.81
KRT13P13646 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT13P13646 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
KRT13P13646 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT13P13646 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT13P13646 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.08■□□□□ 0.8
KRT13P13646 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT13P13646 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT13P13646 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
KRT13P13646 BICD1-207ENST00000551848 1962 ntBASIC20.08■□□□□ 0.8
KRT13P13646 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
KRT13P13646 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.08■□□□□ 0.8
KRT13P13646 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
KRT13P13646 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT13P13646 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 AC135050.7-201ENST00000624508 2218 ntBASIC20.07■□□□□ 0.8
KRT13P13646 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 AC009102.3-201ENST00000623118 1491 ntBASIC20.07■□□□□ 0.8
KRT13P13646 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 ECEL1P3-201ENST00000427961 737 ntBASIC20.07■□□□□ 0.8
KRT13P13646 LIN28AP1-201ENST00000429574 405 ntBASIC20.07■□□□□ 0.8
KRT13P13646 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
KRT13P13646 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT13P13646 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT13P13646 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KRT13P13646 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT13P13646 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT13P13646 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT13P13646 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT13P13646 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT13P13646 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
KRT13P13646 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT13P13646 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT13P13646 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT13P13646 MIR3180-4-201ENST00000582223 153 ntBASIC20.06■□□□□ 0.8
KRT13P13646 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT13P13646 AC024243.1-201ENST00000609234 778 ntBASIC20.06■□□□□ 0.8
KRT13P13646 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT13P13646 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT13P13646 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT13P13646 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT13P13646 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KRT13P13646 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KRT13P13646 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT13P13646 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms