Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
RARAP10276 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RARAP10276 AP000593.1-201ENST00000393668 712 ntBASIC19.27■□□□□ 0.68
RARAP10276 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 WWOX-216ENST00000569818 525 ntBASIC19.27■□□□□ 0.68
RARAP10276 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
RARAP10276 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RARAP10276 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.27■□□□□ 0.67
RARAP10276 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.27■□□□□ 0.67
RARAP10276 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RARAP10276 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
RARAP10276 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
RARAP10276 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RARAP10276 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.26■□□□□ 0.67
RARAP10276 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 AC010653.2-201ENST00000623505 997 ntBASIC19.26■□□□□ 0.67
RARAP10276 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.26■□□□□ 0.67
RARAP10276 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.26■□□□□ 0.67
RARAP10276 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RARAP10276 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 AC138028.4-201ENST00000564984 1845 ntBASIC19.25■□□□□ 0.67
RARAP10276 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
RARAP10276 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RARAP10276 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 NAPSB-206ENST00000562112 1266 ntBASIC19.25■□□□□ 0.67
RARAP10276 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RARAP10276 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
RARAP10276 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RARAP10276 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RARAP10276 AC099343.3-201ENST00000605834 2503 ntBASIC19.24■□□□□ 0.67
RARAP10276 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.24■□□□□ 0.67
RARAP10276 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.24■□□□□ 0.67
RARAP10276 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.24■□□□□ 0.67
RARAP10276 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.24■□□□□ 0.67
RARAP10276 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.24■□□□□ 0.67
RARAP10276 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RARAP10276 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 HOXB1-202ENST00000577092 1414 ntBASIC19.24■□□□□ 0.67
RARAP10276 AC134043.2-201ENST00000624206 2238 ntBASIC19.24■□□□□ 0.67
RARAP10276 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
RARAP10276 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RARAP10276 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RARAP10276 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
RARAP10276 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.24■□□□□ 0.67
RARAP10276 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms