Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TPM2P07951 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM2P07951 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.89■□□□□ 0.94
TPM2P07951 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM2P07951 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM2P07951 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM2P07951 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM2P07951 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TPM2P07951 NBPF21P-201ENST00000425093 1451 ntBASIC20.89■□□□□ 0.94
TPM2P07951 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM2P07951 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.89■□□□□ 0.94
TPM2P07951 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TPM2P07951 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
TPM2P07951 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.89■□□□□ 0.93
TPM2P07951 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM2P07951 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.89■□□□□ 0.93
TPM2P07951 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TPM2P07951 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.89■□□□□ 0.93
TPM2P07951 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.89■□□□□ 0.93
TPM2P07951 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM2P07951 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
TPM2P07951 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM2P07951 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.89■□□□□ 0.93
TPM2P07951 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TPM2P07951 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM2P07951 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM2P07951 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM2P07951 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.88■□□□□ 0.93
TPM2P07951 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM2P07951 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM2P07951 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TPM2P07951 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM2P07951 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TPM2P07951 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
TPM2P07951 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TPM2P07951 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM2P07951 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TPM2P07951 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.87■□□□□ 0.93
TPM2P07951 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM2P07951 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
TPM2P07951 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.87■□□□□ 0.93
TPM2P07951 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TPM2P07951 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.87■□□□□ 0.93
TPM2P07951 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TPM2P07951 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.86■□□□□ 0.93
TPM2P07951 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM2P07951 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.86■□□□□ 0.93
TPM2P07951 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TPM2P07951 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TPM2P07951 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms