Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CHGBP05060 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CHGBP05060 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.03■■□□□ 1.12
CHGBP05060 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.03■■□□□ 1.12
CHGBP05060 PHGDH-209ENST00000641074 1780 ntBASIC22.03■■□□□ 1.12
CHGBP05060 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.03■■□□□ 1.12
CHGBP05060 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
CHGBP05060 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.03■■□□□ 1.12
CHGBP05060 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.03■■□□□ 1.12
CHGBP05060 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CHGBP05060 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.03■■□□□ 1.12
CHGBP05060 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CHGBP05060 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CHGBP05060 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.03■■□□□ 1.12
CHGBP05060 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHGBP05060 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.03■■□□□ 1.12
CHGBP05060 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.03■■□□□ 1.12
CHGBP05060 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.03■■□□□ 1.12
CHGBP05060 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CHGBP05060 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CHGBP05060 Z83836.1-201ENST00000624605 1642 ntBASIC22.02■■□□□ 1.12
CHGBP05060 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.02■■□□□ 1.12
CHGBP05060 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.02■■□□□ 1.12
CHGBP05060 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHGBP05060 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.02■■□□□ 1.12
CHGBP05060 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.02■■□□□ 1.12
CHGBP05060 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC22.02■■□□□ 1.12
CHGBP05060 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.02■■□□□ 1.12
CHGBP05060 AC005332.3-201ENST00000589904 676 ntBASIC22.02■■□□□ 1.12
CHGBP05060 AC011498.5-201ENST00000592027 486 ntBASIC22.02■■□□□ 1.12
CHGBP05060 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CHGBP05060 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.02■■□□□ 1.12
CHGBP05060 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CHGBP05060 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CHGBP05060 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.02■■□□□ 1.11
CHGBP05060 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 AC007613.1-201ENST00000572811 2597 ntBASIC22.01■■□□□ 1.11
CHGBP05060 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.01■■□□□ 1.11
CHGBP05060 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 AC093677.2-201ENST00000600169 1863 ntBASIC22.01■■□□□ 1.11
CHGBP05060 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.01■■□□□ 1.11
CHGBP05060 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CHGBP05060 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.01■■□□□ 1.11
CHGBP05060 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.01■■□□□ 1.11
CHGBP05060 AC024563.2-201ENST00000603282 481 ntBASIC22.01■■□□□ 1.11
CHGBP05060 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.01■■□□□ 1.11
CHGBP05060 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.01■■□□□ 1.11
CHGBP05060 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHGBP05060 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 AC016734.2-201ENST00000624325 1377 ntBASIC22■■□□□ 1.11
CHGBP05060 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22■■□□□ 1.11
CHGBP05060 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 UPK3BP1-201ENST00000428678 509 ntBASIC22■■□□□ 1.11
CHGBP05060 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22■■□□□ 1.11
CHGBP05060 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC22■■□□□ 1.11
CHGBP05060 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22■■□□□ 1.11
CHGBP05060 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22■■□□□ 1.11
CHGBP05060 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CHGBP05060 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22■■□□□ 1.11
CHGBP05060 AC004263.2-201ENST00000617183 678 ntBASIC22■■□□□ 1.11
CHGBP05060 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22■■□□□ 1.11
CHGBP05060 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22■■□□□ 1.11
CHGBP05060 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22■■□□□ 1.11
CHGBP05060 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22■■□□□ 1.11
CHGBP05060 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHGBP05060 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22■■□□□ 1.11
CHGBP05060 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22■■□□□ 1.11
CHGBP05060 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CHGBP05060 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHGBP05060 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHGBP05060 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms