Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.32■□□□□ 0.2
CNOT4O95628 IER3-202ENST00000376377 1350 ntBASIC16.32■□□□□ 0.2
CNOT4O95628 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 AC093458.2-201ENST00000623150 629 ntBASIC16.32■□□□□ 0.2
CNOT4O95628 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNOT4O95628 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CNOT4O95628 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CNOT4O95628 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 SPDYE15P-201ENST00000424157 909 ntBASIC16.31■□□□□ 0.2
CNOT4O95628 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT4O95628 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 FAM86EP-206ENST00000510506 987 ntBASIC16.31■□□□□ 0.2
CNOT4O95628 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CNOT4O95628 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT4O95628 AL136038.3-201ENST00000561909 1096 ntBASIC16.31■□□□□ 0.2
CNOT4O95628 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.31■□□□□ 0.2
CNOT4O95628 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.31■□□□□ 0.2
CNOT4O95628 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 AC004408.2-201ENST00000623613 2777 ntBASIC16.31■□□□□ 0.2
CNOT4O95628 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CNOT4O95628 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.31■□□□□ 0.2
CNOT4O95628 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CNOT4O95628 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.3■□□□□ 0.2
CNOT4O95628 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT4O95628 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CNOT4O95628 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CNOT4O95628 AC093525.10-201ENST00000625130 1569 ntBASIC16.3■□□□□ 0.2
CNOT4O95628 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 HBZP1-201ENST00000354915 429 ntBASIC16.3■□□□□ 0.2
CNOT4O95628 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 KRT18P38-201ENST00000449496 1282 ntBASIC16.3■□□□□ 0.2
CNOT4O95628 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.3■□□□□ 0.2
CNOT4O95628 ZNF444P1-201ENST00000559497 298 ntBASIC16.3■□□□□ 0.2
CNOT4O95628 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.3■□□□□ 0.2
CNOT4O95628 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 HYMAI.1-201ENST00000620949 238 ntBASIC16.3■□□□□ 0.2
CNOT4O95628 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.3■□□□□ 0.2
CNOT4O95628 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT4O95628 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.3■□□□□ 0.2
CNOT4O95628 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CNOT4O95628 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CNOT4O95628 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CNOT4O95628 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNOT4O95628 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.29■□□□□ 0.2
CNOT4O95628 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.29■□□□□ 0.2
CNOT4O95628 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CNOT4O95628 KRT8P50-201ENST00000562022 1438 ntBASIC16.29■□□□□ 0.2
CNOT4O95628 LINC01311-201ENST00000565162 1445 ntBASIC16.29■□□□□ 0.2
CNOT4O95628 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNOT4O95628 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CNOT4O95628 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms