Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
PFDN1O60925 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN1O60925 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 AC116050.2-201ENST00000612102 1779 ntBASIC16.43■□□□□ 0.22
PFDN1O60925 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PFDN1O60925 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PFDN1O60925 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.43■□□□□ 0.22
PFDN1O60925 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.43■□□□□ 0.22
PFDN1O60925 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.43■□□□□ 0.22
PFDN1O60925 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.43■□□□□ 0.22
PFDN1O60925 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PFDN1O60925 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
PFDN1O60925 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN1O60925 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PFDN1O60925 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PFDN1O60925 RNF126P1-201ENST00000567452 1320 ntBASIC16.43■□□□□ 0.22
PFDN1O60925 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.43■□□□□ 0.22
PFDN1O60925 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
PFDN1O60925 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
PFDN1O60925 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PFDN1O60925 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PFDN1O60925 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PFDN1O60925 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.42■□□□□ 0.22
PFDN1O60925 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.42■□□□□ 0.22
PFDN1O60925 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PFDN1O60925 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 KRT8P36-201ENST00000489121 1440 ntBASIC16.42■□□□□ 0.22
PFDN1O60925 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN1O60925 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.42■□□□□ 0.22
PFDN1O60925 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PFDN1O60925 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.42■□□□□ 0.22
PFDN1O60925 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
PFDN1O60925 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PFDN1O60925 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.41■□□□□ 0.22
PFDN1O60925 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.41■□□□□ 0.22
PFDN1O60925 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PFDN1O60925 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PFDN1O60925 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
PFDN1O60925 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PFDN1O60925 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.4■□□□□ 0.22
PFDN1O60925 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms