Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 ABCD1P5-201ENST00000445663 754 ntBASIC17.81■□□□□ 0.44
GDF9O60383 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.81■□□□□ 0.44
GDF9O60383 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
GDF9O60383 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.81■□□□□ 0.44
GDF9O60383 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GDF9O60383 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.81■□□□□ 0.44
GDF9O60383 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 AC009947.1-201ENST00000444350 727 ntBASIC17.8■□□□□ 0.44
GDF9O60383 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF9O60383 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.8■□□□□ 0.44
GDF9O60383 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF9O60383 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.8■□□□□ 0.44
GDF9O60383 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDF9O60383 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDF9O60383 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.8■□□□□ 0.44
GDF9O60383 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
GDF9O60383 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF9O60383 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF9O60383 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 AL645939.2-201ENST00000427340 991 ntBASIC17.79■□□□□ 0.44
GDF9O60383 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.79■□□□□ 0.44
GDF9O60383 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.79■□□□□ 0.44
GDF9O60383 AC005829.1-201ENST00000570002 483 ntBASIC17.79■□□□□ 0.44
GDF9O60383 AC106028.4-201ENST00000614509 607 ntBASIC17.79■□□□□ 0.44
GDF9O60383 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF9O60383 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.79■□□□□ 0.44
GDF9O60383 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.79■□□□□ 0.44
GDF9O60383 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GDF9O60383 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 AL357033.4-201ENST00000617703 1807 ntBASIC17.79■□□□□ 0.44
GDF9O60383 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.79■□□□□ 0.44
GDF9O60383 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDF9O60383 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDF9O60383 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
GDF9O60383 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms