Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 HLA-F-220ENST00000434407 884 ntBASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC093458.2-201ENST00000623150 629 ntBASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC116407.4-201ENST00000623319 1061 ntBASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC112777.1-201ENST00000540175 1423 ntBASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
IGHV4-28A0A0C4DH34 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 PVRIG2P-201ENST00000435460 978 ntBASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 AL163051.1-201ENST00000569214 1512 ntBASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
IGHV4-28A0A0C4DH34 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC069148.1-201ENST00000608741 768 ntBASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
IGHV4-28A0A0C4DH34 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 MYLKP1-201ENST00000509077 1580 ntBASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 AL162741.1-201ENST00000565563 1558 ntBASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms