Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.71□□□□□ -0.22
TRAV9-2A0A087WT02 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ANO7L1-203ENST00000602586 1720 ntBASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 KRT18P29-201ENST00000397031 1267 ntBASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 POU5F1P3-201ENST00000428824 1078 ntBASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 UNC93B5-201ENST00000530315 699 ntBASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRAV9-2A0A087WT02 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ESRRAP1-201ENST00000400596 1257 ntBASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 AC026366.1-201ENST00000488803 879 ntBASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 AC023632.3-201ENST00000521633 145 ntBASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 AP003097.1-201ENST00000530657 1135 ntBASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 TMEM191A-211ENST00000637163 1067 ntBASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.69□□□□□ -0.22
TRAV9-2A0A087WT02 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 PCDH8P1-201ENST00000428983 2773 ntBASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 AC103702.1-201ENST00000548801 2630 ntBASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV9-2A0A087WT02 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms