Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 AC012618.2-201ENST00000428058 849 ntBASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 AC093827.2-201ENST00000512654 315 ntBASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4B1Q9Y6B7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AC104417.2-201ENST00000562989 1793 ntBASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 RPS2P4-201ENST00000476944 856 ntBASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 HTR7P1-201ENST00000538670 1336 ntBASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4B1Q9Y6B7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AL139384.1-201ENST00000612143 3047 ntBASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 RPS2P55-201ENST00000397318 883 ntBASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AC107956.1-201ENST00000494359 873 ntBASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AC233702.5-201ENST00000584107 538 ntBASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4B1Q9Y6B7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms