Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 MRPL3P1-201ENST00000400109 1033 ntBASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 AC106795.1-205ENST00000512851 1056 ntBASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
SNX11Q9Y5W9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 AL161938.1-201ENST00000569833 2180 ntBASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNX11Q9Y5W9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 RN7SL606P-201ENST00000472779 293 ntBASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 AL662844.1-201ENST00000546340 181 ntBASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 AC141586.3-201ENST00000562166 1838 ntBASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNX11Q9Y5W9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNX11Q9Y5W9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms