Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 FAM86EP-206ENST00000510506 987 ntBASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAI2Q9Y5P3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 GPALPP1-207ENST00000611650 899 ntBASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 AC104581.1-202ENST00000635932 2618 ntBASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAI2Q9Y5P3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 AC090164.3-201ENST00000610780 2143 ntBASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
RAI2Q9Y5P3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.55■□□□□ 0.56
RAI2Q9Y5P3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms