Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 HMGA1P5-201ENST00000412453 271 ntBASIC12□□□□□ -0.49
LINC00474Q9P2X8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 GXYLT1P3-201ENST00000453058 1193 ntBASIC12□□□□□ -0.49
LINC00474Q9P2X8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 AL023803.3-201ENST00000615559 522 ntBASIC12□□□□□ -0.49
LINC00474Q9P2X8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 LINC01568-207ENST00000641790 1380 ntBASIC12□□□□□ -0.49
LINC00474Q9P2X8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12□□□□□ -0.49
LINC00474Q9P2X8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00474Q9P2X8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 AL049812.1-201ENST00000432563 2267 ntBASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 LIN28AP1-201ENST00000429574 405 ntBASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 AC092338.2-201ENST00000568827 1415 ntBASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 RCC2P3-201ENST00000418112 1537 ntBASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 HEIH-201ENST00000623091 1652 ntBASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
LINC00474Q9P2X8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 AP000593.1-201ENST00000393668 712 ntBASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 AL390955.1-201ENST00000428694 934 ntBASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC00474Q9P2X8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms