Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.71■□□□□ 0.59
ABCF3Q9NUQ8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 AL645608.8-201ENST00000606034 2086 ntBASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 AC012317.2-201ENST00000623305 2251 ntBASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCF3Q9NUQ8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AL160286.2-201ENST00000567150 934 ntBASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AF186192.3-201ENST00000583427 947 ntBASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCF3Q9NUQ8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ABCF3Q9NUQ8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms