Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 AC008556.1-201ENST00000610908 2040 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 HCG11-201ENST00000411553 5696 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 KRASP1-201ENST00000407852 552 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 PRKY-204ENST00000533551 1019 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 RN7SL850P-201ENST00000579959 291 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CD177P1-201ENST00000606252 935 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 AC108860.2-201ENST00000562760 2183 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2LQ9NUG4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 AC080080.1-201ENST00000625121 2420 ntBASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2LQ9NUG4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 AL160286.2-201ENST00000567150 934 ntBASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2LQ9NUG4 KRT8P32-201ENST00000512863 1461 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms