Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 AC106886.4-201ENST00000623557 2502 ntBASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 PAUPAR-201ENST00000630360 2965 ntBASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CDC42SE1Q9NRR8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 AC131274.2-201ENST00000580697 1507 ntBASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42SE1Q9NRR8 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42SE1Q9NRR8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms