Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC233263.1-201ENST00000578059 224 ntBASIC20.54■□□□□ 0.88
CBX8Q9HC52 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AC133041.1-202ENST00000642053 222 ntBASIC20.54■□□□□ 0.88
CBX8Q9HC52 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CBX8Q9HC52 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.54■□□□□ 0.88
CBX8Q9HC52 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 KRT16P5-201ENST00000455284 522 ntBASIC20.53■□□□□ 0.88
CBX8Q9HC52 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CBX8Q9HC52 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CBX8Q9HC52 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC124067.4-201ENST00000519691 2379 ntBASIC20.52■□□□□ 0.88
CBX8Q9HC52 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC138932.1-201ENST00000534164 6830 ntBASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC022211.2-201ENST00000585075 2527 ntBASIC20.52■□□□□ 0.88
CBX8Q9HC52 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 AC069544.1-201ENST00000609399 999 ntBASIC20.52■□□□□ 0.88
CBX8Q9HC52 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CBX8Q9HC52 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CBX8Q9HC52 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CBX8Q9HC52 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CBX8Q9HC52 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 CKBP1-201ENST00000565489 1086 ntBASIC20.51■□□□□ 0.87
CBX8Q9HC52 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 AC008622.2-201ENST00000617006 1229 ntBASIC20.51■□□□□ 0.87
CBX8Q9HC52 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
CBX8Q9HC52 AL023875.1-201ENST00000640777 796 ntBASIC20.51■□□□□ 0.87
CBX8Q9HC52 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CBX8Q9HC52 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms