Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC68Q9H2F9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 MYLKP1-201ENST00000509077 1580 ntBASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 AP000593.1-201ENST00000393668 712 ntBASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 FITM1-202ENST00000559294 800 ntBASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC68Q9H2F9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 AC135050.7-201ENST00000624508 2218 ntBASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 KRT18P41-201ENST00000518924 1277 ntBASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 MIR4497-201ENST00000583208 89 ntBASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 AC116562.4-202ENST00000641738 218 ntBASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 AC005332.8-201ENST00000622750 2735 ntBASIC18.43■□□□□ 0.54
CCDC68Q9H2F9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AL390955.1-201ENST00000428694 934 ntBASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AL355075.4-201ENST00000554988 638 ntBASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AL353719.1-201ENST00000566847 864 ntBASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC68Q9H2F9 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms