Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 AL359736.2-201ENST00000621992 437 ntBASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2J3Q9H1A7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.02■□□□□ 0.31
POLR2J3Q9H1A7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MIR564-202ENST00000385049 94 ntBASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MCCD1P1-208ENST00000445732 328 ntBASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 AC093677.2-201ENST00000600169 1863 ntBASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR2J3Q9H1A7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17■□□□□ 0.31
POLR2J3Q9H1A7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 AC116562.2-201ENST00000507042 360 ntBASIC17■□□□□ 0.31
POLR2J3Q9H1A7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR2J3Q9H1A7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 GNAS-203ENST00000306120 1878 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms