Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS1Q99742 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AC010240.3-201ENST00000607688 395 ntBASIC16.74■□□□□ 0.27
NPAS1Q99742 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS1Q99742 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NPAS1Q99742 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NPAS1Q99742 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS1Q99742 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS1Q99742 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NPAS1Q99742 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
NPAS1Q99742 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 RNF152P1-201ENST00000397754 604 ntBASIC16.73■□□□□ 0.27
NPAS1Q99742 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS1Q99742 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.73■□□□□ 0.27
NPAS1Q99742 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 AL163051.1-201ENST00000569214 1512 ntBASIC16.73■□□□□ 0.27
NPAS1Q99742 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
NPAS1Q99742 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS1Q99742 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPAS1Q99742 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS1Q99742 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 KRT8P7-201ENST00000533003 1432 ntBASIC16.72■□□□□ 0.27
NPAS1Q99742 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NPAS1Q99742 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.72■□□□□ 0.27
NPAS1Q99742 AC063952.2-201ENST00000498792 1227 ntBASIC16.72■□□□□ 0.27
NPAS1Q99742 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 AC079602.3-201ENST00000623931 403 ntBASIC16.72■□□□□ 0.27
NPAS1Q99742 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS1Q99742 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS1Q99742 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS1Q99742 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.71■□□□□ 0.27
NPAS1Q99742 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
NPAS1Q99742 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NPAS1Q99742 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 SDHAP2-201ENST00000455183 2001 ntBASIC16.71■□□□□ 0.27
NPAS1Q99742 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NPAS1Q99742 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.71■□□□□ 0.27
NPAS1Q99742 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms