Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 AL096828.2-201ENST00000567259 1965 ntBASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VCPIP1Q96JH7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 SEC1P-202ENST00000473944 940 ntBASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCPIP1Q96JH7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 KRT18P22-201ENST00000402024 1347 ntBASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 AC009947.2-201ENST00000444014 672 ntBASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 AC020763.4-201ENST00000623414 4170 ntBASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCPIP1Q96JH7 AC008764.6-201ENST00000595909 2069 ntBASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 LINC01568-207ENST00000641790 1380 ntBASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 AC012306.2-201ENST00000609350 630 ntBASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
VCPIP1Q96JH7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.33■□□□□ 0.69
VCPIP1Q96JH7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCPIP1Q96JH7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.33■□□□□ 0.69
VCPIP1Q96JH7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms