Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCHCR1Q8TD31 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 MESTP1-201ENST00000404287 994 ntBASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 AP000692.2-201ENST00000608391 879 ntBASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCHCR1Q8TD31 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 AC135776.1-201ENST00000319817 2481 ntBASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 AL355075.4-201ENST00000554988 638 ntBASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CCHCR1Q8TD31 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 RBM17P1-201ENST00000453646 1190 ntBASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC097488.1-201ENST00000507834 756 ntBASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 KRT18P41-201ENST00000518924 1277 ntBASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 SLC25A1P4-201ENST00000567977 778 ntBASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AC093677.2-201ENST00000600169 1863 ntBASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCHCR1Q8TD31 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms