Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SVIPQ8NHG7 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.5□□□□□ -0.57
SVIPQ8NHG7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SVIPQ8NHG7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SVIPQ8NHG7 AC018445.4-201ENST00000624066 2291 ntBASIC11.49□□□□□ -0.57
SVIPQ8NHG7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 AC073592.3-201ENST00000625118 1834 ntBASIC11.49□□□□□ -0.57
SVIPQ8NHG7 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 AJ011931.1-201ENST00000618749 2492 ntBASIC11.49□□□□□ -0.57
SVIPQ8NHG7 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
SVIPQ8NHG7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC026691.1-201ENST00000602502 2017 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC092364.2-201ENST00000596710 2692 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AL359641.1-201ENST00000412509 1558 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 ESPNP-201ENST00000270691 2015 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SP100-206ENST00000409897 2037 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC138749.1-201ENST00000567652 2472 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 AC020763.3-201ENST00000625095 2904 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 PCDHB19P-202ENST00000625133 2914 ntBASIC11.48□□□□□ -0.57
SVIPQ8NHG7 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SVIPQ8NHG7 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
SVIPQ8NHG7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms