Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00301Q8NCQ3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 CCR12P-201ENST00000446203 998 ntBASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 BX088651.1-201ENST00000540551 451 ntBASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 LINC01126-201ENST00000623515 1646 ntBASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00301Q8NCQ3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 MIR1238-201ENST00000408483 83 ntBASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 AL355075.4-201ENST00000554988 638 ntBASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 TMEM191A-211ENST00000637163 1067 ntBASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 AC116562.4-202ENST00000641738 218 ntBASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 GNAS-203ENST00000306120 1878 ntBASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00301Q8NCQ3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00301Q8NCQ3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.89■□□□□ 0.94
LINC00301Q8NCQ3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 SNORA78-201ENST00000459373 127 ntBASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 AC104390.1-201ENST00000555663 520 ntBASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LINC00301Q8NCQ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 TSPY14P-201ENST00000303979 915 ntBASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 INGX-201ENST00000359239 846 ntBASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 LINC00896-202ENST00000609602 2128 ntBASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00301Q8NCQ3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms