Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CYS1Q717R9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.33■□□□□ 0.53
CYS1Q717R9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYS1Q717R9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CYS1Q717R9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CYS1Q717R9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 AL355355.2-201ENST00000442321 338 ntBASIC18.33■□□□□ 0.52
CYS1Q717R9 AP003041.3-201ENST00000527151 707 ntBASIC18.33■□□□□ 0.52
CYS1Q717R9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.33■□□□□ 0.52
CYS1Q717R9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.33■□□□□ 0.52
CYS1Q717R9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.33■□□□□ 0.52
CYS1Q717R9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.33■□□□□ 0.52
CYS1Q717R9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 CR769767.2-201ENST00000622735 460 ntBASIC18.33■□□□□ 0.52
CYS1Q717R9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CYS1Q717R9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CYS1Q717R9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
CYS1Q717R9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CYS1Q717R9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.32■□□□□ 0.52
CYS1Q717R9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.32■□□□□ 0.52
CYS1Q717R9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.32■□□□□ 0.52
CYS1Q717R9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CYS1Q717R9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CYS1Q717R9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
CYS1Q717R9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.31■□□□□ 0.52
CYS1Q717R9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 GCSHP5-201ENST00000443090 522 ntBASIC18.31■□□□□ 0.52
CYS1Q717R9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.31■□□□□ 0.52
CYS1Q717R9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.31■□□□□ 0.52
CYS1Q717R9 AC026471.5-201ENST00000615068 467 ntBASIC18.31■□□□□ 0.52
CYS1Q717R9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CYS1Q717R9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
CYS1Q717R9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CYS1Q717R9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CYS1Q717R9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYS1Q717R9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYS1Q717R9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYS1Q717R9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CYS1Q717R9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.3■□□□□ 0.52
CYS1Q717R9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.3■□□□□ 0.52
CYS1Q717R9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CYS1Q717R9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms