Protein–RNA interactions for Protein: Q4LDR2

CTXN3, Cortexin-3, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN3Q4LDR2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTXN3Q4LDR2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTXN3Q4LDR2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AL845331.1-201ENST00000424978 1190 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 KRT17P6-201ENST00000453795 1220 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 VENTXP7-201ENST00000475503 772 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AC091304.2-201ENST00000564639 760 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 IFNL4P1-201ENST00000607083 540 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTXN3Q4LDR2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 AC004870.1-201ENST00000315132 882 ntBASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 AC099336.1-202ENST00000602961 463 ntBASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 AC138894.3-201ENST00000603787 634 ntBASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTXN3Q4LDR2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTXN3Q4LDR2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTXN3Q4LDR2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTXN3Q4LDR2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 AC113404.2-201ENST00000507884 177 ntBASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 AC011840.4-201ENST00000578471 627 ntBASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 AL024508.2-201ENST00000607749 1894 ntBASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTXN3Q4LDR2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 KRT18P31-201ENST00000506277 1292 ntBASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 LINC01711-201ENST00000598340 967 ntBASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.38■□□□□ 0.69
CTXN3Q4LDR2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms