Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PRICKLE4Q2TBC4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 AC079602.3-201ENST00000623931 403 ntBASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 ABALON-201ENST00000629058 1903 ntBASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PRICKLE4Q2TBC4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 PHGDH-209ENST00000641074 1780 ntBASIC17.08■□□□□ 0.33
PRICKLE4Q2TBC4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 KRT18P38-201ENST00000449496 1282 ntBASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 DUX4L26-201ENST00000489078 1255 ntBASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 AC063952.2-201ENST00000498792 1227 ntBASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PRICKLE4Q2TBC4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 AL390961.4-201ENST00000623958 2535 ntBASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 AL359075.1-203ENST00000462729 1002 ntBASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PRICKLE4Q2TBC4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms