Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SPCS3P61009 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 AC135776.1-201ENST00000319817 2481 ntBASIC14.98□□□□□ -0.01
SPCS3P61009 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 KRT17P3-201ENST00000420566 1262 ntBASIC14.98□□□□□ -0.01
SPCS3P61009 MTDHP1-201ENST00000605323 784 ntBASIC14.98□□□□□ -0.01
SPCS3P61009 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.98□□□□□ -0.01
SPCS3P61009 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SPCS3P61009 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.98□□□□□ -0.01
SPCS3P61009 AL357033.4-201ENST00000617703 1807 ntBASIC14.98□□□□□ -0.01
SPCS3P61009 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
SPCS3P61009 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SPCS3P61009 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.98□□□□□ -0.01
SPCS3P61009 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 C8orf49-201ENST00000525043 1968 ntBASIC14.97□□□□□ -0.01
SPCS3P61009 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 SLC25A6P5-201ENST00000435663 894 ntBASIC14.97□□□□□ -0.01
SPCS3P61009 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 KRT16P5-201ENST00000455284 522 ntBASIC14.97□□□□□ -0.01
SPCS3P61009 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.97□□□□□ -0.01
SPCS3P61009 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.97□□□□□ -0.01
SPCS3P61009 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 AC131212.4-201ENST00000623606 975 ntBASIC14.97□□□□□ -0.01
SPCS3P61009 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SPCS3P61009 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.97□□□□□ -0.01
SPCS3P61009 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPCS3P61009 AC084018.2-201ENST00000613093 2607 ntBASIC14.96□□□□□ -0.01
SPCS3P61009 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.96□□□□□ -0.01
SPCS3P61009 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.96□□□□□ -0.01
SPCS3P61009 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPCS3P61009 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPCS3P61009 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SPCS3P61009 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPCS3P61009 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.96□□□□□ -0.01
SPCS3P61009 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.96□□□□□ -0.01
SPCS3P61009 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.96□□□□□ -0.01
SPCS3P61009 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms