Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC083849.1-201ENST00000615227 514 ntBASIC17.27■□□□□ 0.36
RAB38P57729 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB38P57729 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB38P57729 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB38P57729 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB38P57729 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.27■□□□□ 0.35
RAB38P57729 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB38P57729 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB38P57729 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB38P57729 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB38P57729 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB38P57729 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB38P57729 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB38P57729 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB38P57729 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
RAB38P57729 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAB38P57729 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 AL024508.2-201ENST00000607749 1894 ntBASIC17.26■□□□□ 0.35
RAB38P57729 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
RAB38P57729 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB38P57729 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB38P57729 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB38P57729 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.25■□□□□ 0.35
RAB38P57729 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB38P57729 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.25■□□□□ 0.35
RAB38P57729 ZNF444P1-201ENST00000559497 298 ntBASIC17.25■□□□□ 0.35
RAB38P57729 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAB38P57729 AC008687.5-201ENST00000593746 558 ntBASIC17.25■□□□□ 0.35
RAB38P57729 AC024563.2-201ENST00000603282 481 ntBASIC17.25■□□□□ 0.35
RAB38P57729 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RAB38P57729 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAB38P57729 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RAB38P57729 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 AL031133.1-201ENST00000406807 723 ntBASIC17.24■□□□□ 0.35
RAB38P57729 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.24■□□□□ 0.35
RAB38P57729 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB38P57729 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB38P57729 AC087388.1-201ENST00000571370 1112 ntBASIC17.24■□□□□ 0.35
RAB38P57729 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.24■□□□□ 0.35
RAB38P57729 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
RAB38P57729 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.24■□□□□ 0.35
RAB38P57729 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.24■□□□□ 0.35
RAB38P57729 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAB38P57729 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms