Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NR1H2P55055 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 ZNF815P-204ENST00000434898 1737 ntBASIC17.44■□□□□ 0.38
NR1H2P55055 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.44■□□□□ 0.38
NR1H2P55055 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 Z99916.2-201ENST00000604037 246 ntBASIC17.44■□□□□ 0.38
NR1H2P55055 AC083906.6-201ENST00000641366 219 ntBASIC17.44■□□□□ 0.38
NR1H2P55055 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.44■□□□□ 0.38
NR1H2P55055 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.44■□□□□ 0.38
NR1H2P55055 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR1H2P55055 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H2P55055 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H2P55055 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 KRASP1-201ENST00000407852 552 ntBASIC17.43■□□□□ 0.38
NR1H2P55055 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H2P55055 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.43■□□□□ 0.38
NR1H2P55055 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.43■□□□□ 0.38
NR1H2P55055 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 AL118508.1-201ENST00000613502 2345 ntBASIC17.43■□□□□ 0.38
NR1H2P55055 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NR1H2P55055 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NR1H2P55055 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.43■□□□□ 0.38
NR1H2P55055 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR1H2P55055 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 SNORA78-201ENST00000459373 127 ntBASIC17.42■□□□□ 0.38
NR1H2P55055 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.42■□□□□ 0.38
NR1H2P55055 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.42■□□□□ 0.38
NR1H2P55055 AC233702.5-201ENST00000584107 538 ntBASIC17.42■□□□□ 0.38
NR1H2P55055 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR1H2P55055 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NR1H2P55055 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.42■□□□□ 0.38
NR1H2P55055 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.42■□□□□ 0.38
NR1H2P55055 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NR1H2P55055 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.41■□□□□ 0.38
NR1H2P55055 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
NR1H2P55055 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
NR1H2P55055 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms