Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.28■□□□□ 0.52
NUBP1P53384 AL513190.1-201ENST00000621254 727 ntBASIC18.28■□□□□ 0.52
NUBP1P53384 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUBP1P53384 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
NUBP1P53384 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 FBXW4P1-201ENST00000426721 2239 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 AL162377.1-201ENST00000618844 1793 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 AC013470.3-201ENST00000420252 1194 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 HLA-J-202ENST00000469281 1241 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.27■□□□□ 0.52
NUBP1P53384 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.27■□□□□ 0.52
NUBP1P53384 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC18.27■□□□□ 0.52
NUBP1P53384 AC006557.2-201ENST00000592985 1240 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 AC005014.3-201ENST00000605985 190 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
NUBP1P53384 AP000867.4-201ENST00000641616 219 ntBASIC18.27■□□□□ 0.52
NUBP1P53384 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUBP1P53384 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUBP1P53384 ELL2P1-201ENST00000413990 1906 ntBASIC18.27■□□□□ 0.51
NUBP1P53384 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUBP1P53384 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUBP1P53384 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
NUBP1P53384 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NUBP1P53384 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.26■□□□□ 0.51
NUBP1P53384 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.26■□□□□ 0.51
NUBP1P53384 CT45A11P-201ENST00000448043 1134 ntBASIC18.26■□□□□ 0.51
NUBP1P53384 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC18.26■□□□□ 0.51
NUBP1P53384 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.26■□□□□ 0.51
NUBP1P53384 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.26■□□□□ 0.51
NUBP1P53384 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.26■□□□□ 0.51
NUBP1P53384 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.26■□□□□ 0.51
NUBP1P53384 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
NUBP1P53384 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.26■□□□□ 0.51
NUBP1P53384 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NUBP1P53384 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUBP1P53384 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 AC125634.1-201ENST00000438758 1403 ntBASIC18.25■□□□□ 0.51
NUBP1P53384 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 RPS26-201ENST00000356464 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 ALG1L5P-201ENST00000482043 771 ntBASIC18.25■□□□□ 0.51
NUBP1P53384 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.25■□□□□ 0.51
NUBP1P53384 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.25■□□□□ 0.51
NUBP1P53384 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NUBP1P53384 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.25■□□□□ 0.51
NUBP1P53384 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NUBP1P53384 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NUBP1P53384 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NUBP1P53384 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NUBP1P53384 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms