Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 AC011506.1-201ENST00000474329 610 ntBASIC17.61■□□□□ 0.41
POLR2JP52435 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
POLR2JP52435 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.61■□□□□ 0.41
POLR2JP52435 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.61■□□□□ 0.41
POLR2JP52435 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.61■□□□□ 0.41
POLR2JP52435 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
POLR2JP52435 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2JP52435 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2JP52435 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
POLR2JP52435 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR2JP52435 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
POLR2JP52435 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
POLR2JP52435 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR2JP52435 AC073648.6-201ENST00000641589 218 ntBASIC17.6■□□□□ 0.41
POLR2JP52435 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
POLR2JP52435 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
POLR2JP52435 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
POLR2JP52435 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR2JP52435 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
POLR2JP52435 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2JP52435 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
POLR2JP52435 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2JP52435 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
POLR2JP52435 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2JP52435 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.59■□□□□ 0.41
POLR2JP52435 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.59■□□□□ 0.41
POLR2JP52435 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
POLR2JP52435 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
POLR2JP52435 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
POLR2JP52435 B3GAT3P1-201ENST00000471720 806 ntBASIC17.59■□□□□ 0.41
POLR2JP52435 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2JP52435 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.59■□□□□ 0.41
POLR2JP52435 MIR6786-201ENST00000616843 113 ntBASIC17.59■□□□□ 0.41
POLR2JP52435 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.59■□□□□ 0.41
POLR2JP52435 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2JP52435 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2JP52435 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.41
POLR2JP52435 PHGDH-209ENST00000641074 1780 ntBASIC17.58■□□□□ 0.41
POLR2JP52435 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.58■□□□□ 0.41
POLR2JP52435 AC034236.2-201ENST00000606662 1610 ntBASIC17.58■□□□□ 0.41
POLR2JP52435 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
POLR2JP52435 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
POLR2JP52435 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2JP52435 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
POLR2JP52435 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2JP52435 AL023284.2-201ENST00000405850 579 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms