Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.67■□□□□ 0.9
CENPFP49454 KRT18P28-201ENST00000453838 1332 ntBASIC20.67■□□□□ 0.9
CENPFP49454 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
CENPFP49454 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CENPFP49454 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.67■□□□□ 0.9
CENPFP49454 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CENPFP49454 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CENPFP49454 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CENPFP49454 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 KRT18P27-201ENST00000427733 1299 ntBASIC20.66■□□□□ 0.9
CENPFP49454 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.66■□□□□ 0.9
CENPFP49454 AC027612.4-201ENST00000605371 583 ntBASIC20.66■□□□□ 0.9
CENPFP49454 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CENPFP49454 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.66■□□□□ 0.9
CENPFP49454 AL096865.1-201ENST00000606796 927 ntBASIC20.66■□□□□ 0.9
CENPFP49454 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPFP49454 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPFP49454 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.65■□□□□ 0.9
CENPFP49454 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.65■□□□□ 0.9
CENPFP49454 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.65■□□□□ 0.9
CENPFP49454 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPFP49454 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPFP49454 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CENPFP49454 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPFP49454 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPFP49454 MIR1199-201ENST00000621445 119 ntBASIC20.65■□□□□ 0.9
CENPFP49454 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPFP49454 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.64■□□□□ 0.9
CENPFP49454 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.64■□□□□ 0.9
CENPFP49454 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CENPFP49454 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CENPFP49454 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 RNA5SP416-201ENST00000516838 111 ntBASIC20.64■□□□□ 0.89
CENPFP49454 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.64■□□□□ 0.89
CENPFP49454 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.64■□□□□ 0.89
CENPFP49454 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.64■□□□□ 0.89
CENPFP49454 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 AC092364.2-202ENST00000597012 1073 ntBASIC20.64■□□□□ 0.89
CENPFP49454 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 AC008735.5-201ENST00000623544 497 ntBASIC20.64■□□□□ 0.89
CENPFP49454 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPFP49454 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPFP49454 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.63■□□□□ 0.89
CENPFP49454 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.63■□□□□ 0.89
CENPFP49454 AC009947.1-201ENST00000444350 727 ntBASIC20.63■□□□□ 0.89
CENPFP49454 OR7E14P-202ENST00000530490 1290 ntBASIC20.63■□□□□ 0.89
CENPFP49454 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
CENPFP49454 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CENPFP49454 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.63■□□□□ 0.89
CENPFP49454 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms