Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT20P35900 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.5■□□□□ 0.39
KRT20P35900 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
KRT20P35900 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
KRT20P35900 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
KRT20P35900 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.5■□□□□ 0.39
KRT20P35900 FITM1-202ENST00000559294 800 ntBASIC17.5■□□□□ 0.39
KRT20P35900 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.5■□□□□ 0.39
KRT20P35900 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
KRT20P35900 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.5■□□□□ 0.39
KRT20P35900 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
KRT20P35900 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.49■□□□□ 0.39
KRT20P35900 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.49■□□□□ 0.39
KRT20P35900 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
KRT20P35900 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
KRT20P35900 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.49■□□□□ 0.39
KRT20P35900 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
KRT20P35900 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT20P35900 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 MMP23A-201ENST00000234610 1017 ntBASIC17.48■□□□□ 0.39
KRT20P35900 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 AL390955.1-201ENST00000428694 934 ntBASIC17.48■□□□□ 0.39
KRT20P35900 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 CA15P1-201ENST00000481698 905 ntBASIC17.48■□□□□ 0.39
KRT20P35900 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT20P35900 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT20P35900 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT20P35900 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT20P35900 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms