Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA3P32297 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
CHRNA3P32297 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHRNA3P32297 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CHRNA3P32297 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 AC128688.1-201ENST00000487626 519 ntBASIC19.39■□□□□ 0.69
CHRNA3P32297 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.39■□□□□ 0.69
CHRNA3P32297 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.39■□□□□ 0.69
CHRNA3P32297 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA3P32297 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA3P32297 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.69
CHRNA3P32297 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.39■□□□□ 0.69
CHRNA3P32297 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 ESPNP-201ENST00000270691 2015 ntBASIC19.39■□□□□ 0.69
CHRNA3P32297 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.39■□□□□ 0.69
CHRNA3P32297 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHRNA3P32297 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHRNA3P32297 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CHRNA3P32297 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CHRNA3P32297 AC113347.1-201ENST00000413321 391 ntBASIC19.38■□□□□ 0.69
CHRNA3P32297 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA3P32297 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 SLC25A3P1-201ENST00000443844 931 ntBASIC19.38■□□□□ 0.69
CHRNA3P32297 ECEL1P2-202ENST00000465689 757 ntBASIC19.38■□□□□ 0.69
CHRNA3P32297 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.38■□□□□ 0.69
CHRNA3P32297 PRSS44-201ENST00000515154 1146 ntBASIC19.38■□□□□ 0.69
CHRNA3P32297 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.38■□□□□ 0.69
CHRNA3P32297 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 CKBP1-201ENST00000565489 1086 ntBASIC19.38■□□□□ 0.69
CHRNA3P32297 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CHRNA3P32297 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
CHRNA3P32297 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHRNA3P32297 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHRNA3P32297 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 AC093677.2-201ENST00000600169 1863 ntBASIC19.37■□□□□ 0.69
CHRNA3P32297 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.37■□□□□ 0.69
CHRNA3P32297 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA3P32297 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA3P32297 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA3P32297 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 AC005521.1-201ENST00000393351 872 ntBASIC19.37■□□□□ 0.69
CHRNA3P32297 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.37■□□□□ 0.69
CHRNA3P32297 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHRNA3P32297 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.37■□□□□ 0.69
CHRNA3P32297 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHRNA3P32297 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHRNA3P32297 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms