Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 AL163051.1-201ENST00000569214 1512 ntBASIC15.52■□□□□ 0.07
COL8A2P25067 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL8A2P25067 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 AC093525.10-201ENST00000625130 1569 ntBASIC15.51■□□□□ 0.07
COL8A2P25067 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
COL8A2P25067 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL8A2P25067 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 AP003733.1-201ENST00000491725 852 ntBASIC15.51■□□□□ 0.07
COL8A2P25067 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.51■□□□□ 0.07
COL8A2P25067 AC005332.3-201ENST00000589904 676 ntBASIC15.51■□□□□ 0.07
COL8A2P25067 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.51■□□□□ 0.07
COL8A2P25067 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
COL8A2P25067 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL8A2P25067 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL8A2P25067 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.51■□□□□ 0.07
COL8A2P25067 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
COL8A2P25067 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 AP000593.1-201ENST00000393668 712 ntBASIC15.5■□□□□ 0.07
COL8A2P25067 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
COL8A2P25067 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.5■□□□□ 0.07
COL8A2P25067 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.5■□□□□ 0.07
COL8A2P25067 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.5■□□□□ 0.07
COL8A2P25067 AC009065.1-201ENST00000564055 1225 ntBASIC15.5■□□□□ 0.07
COL8A2P25067 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.5■□□□□ 0.07
COL8A2P25067 AC092329.2-201ENST00000598402 547 ntBASIC15.5■□□□□ 0.07
COL8A2P25067 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
COL8A2P25067 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
COL8A2P25067 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL8A2P25067 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.49■□□□□ 0.07
COL8A2P25067 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.49■□□□□ 0.07
COL8A2P25067 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms