Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHMP24386 AL023803.3-201ENST00000615559 522 ntBASIC17.2■□□□□ 0.34
CHMP24386 AC010653.2-201ENST00000623505 997 ntBASIC17.2■□□□□ 0.34
CHMP24386 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHMP24386 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.2■□□□□ 0.34
CHMP24386 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHMP24386 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.2■□□□□ 0.34
CHMP24386 FZD10-202ENST00000539839 3282 ntBASIC17.2■□□□□ 0.34
CHMP24386 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHMP24386 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHMP24386 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHMP24386 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
CHMP24386 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 AC008764.6-201ENST00000595909 2069 ntBASIC17.19■□□□□ 0.34
CHMP24386 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CHMP24386 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.19■□□□□ 0.34
CHMP24386 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP24386 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP24386 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP24386 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHMP24386 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
CHMP24386 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHMP24386 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP24386 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP24386 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CHMP24386 KRT18P21-201ENST00000515767 1272 ntBASIC17.18■□□□□ 0.34
CHMP24386 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHMP24386 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 AL353719.1-201ENST00000566847 864 ntBASIC17.18■□□□□ 0.34
CHMP24386 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP24386 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.18■□□□□ 0.34
CHMP24386 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHMP24386 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.18■□□□□ 0.34
CHMP24386 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.18■□□□□ 0.34
CHMP24386 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHMP24386 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.17■□□□□ 0.34
CHMP24386 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 HEIH-201ENST00000623091 1652 ntBASIC17.17■□□□□ 0.34
CHMP24386 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CHMP24386 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CHMP24386 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.17■□□□□ 0.34
CHMP24386 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 AC113347.1-201ENST00000413321 391 ntBASIC17.17■□□□□ 0.34
CHMP24386 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 SLC25A3P1-201ENST00000443844 931 ntBASIC17.17■□□□□ 0.34
CHMP24386 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHMP24386 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms