Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 PTBP1P-201ENST00000554374 1601 ntBASIC14.31□□□□□ -0.12
RAB5AP20339 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 POU5F1P4-201ENST00000413175 1085 ntBASIC14.31□□□□□ -0.12
RAB5AP20339 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.31□□□□□ -0.12
RAB5AP20339 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB5AP20339 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB5AP20339 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB5AP20339 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB5AP20339 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB5AP20339 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 AC026691.1-201ENST00000602502 2017 ntBASIC14.3□□□□□ -0.12
RAB5AP20339 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RAB5AP20339 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.3□□□□□ -0.12
RAB5AP20339 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.3□□□□□ -0.12
RAB5AP20339 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
RAB5AP20339 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RAB5AP20339 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB5AP20339 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.3□□□□□ -0.12
RAB5AP20339 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.3□□□□□ -0.12
RAB5AP20339 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB5AP20339 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 FEM1AP3-201ENST00000403722 1741 ntBASIC14.29□□□□□ -0.12
RAB5AP20339 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5AP20339 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5AP20339 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAB5AP20339 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB5AP20339 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5AP20339 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB5AP20339 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB5AP20339 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.29□□□□□ -0.12
RAB5AP20339 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
RAB5AP20339 AC132872.4-202ENST00000622924 2756 ntBASIC14.29□□□□□ -0.12
RAB5AP20339 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAB5AP20339 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.29□□□□□ -0.12
RAB5AP20339 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.29□□□□□ -0.12
RAB5AP20339 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms