Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AC139713.2-201ENST00000641328 2723 ntBASIC18.16■□□□□ 0.5
NELFEP18615 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.16■□□□□ 0.5
NELFEP18615 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.16■□□□□ 0.5
NELFEP18615 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.16■□□□□ 0.5
NELFEP18615 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.16■□□□□ 0.5
NELFEP18615 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 AC020916.1-201ENST00000587762 1774 ntBASIC18.16■□□□□ 0.5
NELFEP18615 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.16■□□□□ 0.5
NELFEP18615 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NELFEP18615 HCG11-201ENST00000411553 5696 ntBASIC18.16■□□□□ 0.5
NELFEP18615 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NELFEP18615 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.15■□□□□ 0.5
NELFEP18615 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.15■□□□□ 0.5
NELFEP18615 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
NELFEP18615 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.15■□□□□ 0.5
NELFEP18615 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
NELFEP18615 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 AP000523.1-201ENST00000398242 1049 ntBASIC18.15■□□□□ 0.5
NELFEP18615 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.15■□□□□ 0.5
NELFEP18615 HOMER2P1-201ENST00000455653 964 ntBASIC18.15■□□□□ 0.5
NELFEP18615 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.15■□□□□ 0.5
NELFEP18615 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.15■□□□□ 0.5
NELFEP18615 AL023973.1-201ENST00000624619 620 ntBASIC18.15■□□□□ 0.5
NELFEP18615 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 MYC-208ENST00000641036 567 ntBASIC18.15■□□□□ 0.5
NELFEP18615 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.15■□□□□ 0.5
NELFEP18615 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NELFEP18615 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
NELFEP18615 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NELFEP18615 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.14■□□□□ 0.49
NELFEP18615 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.14■□□□□ 0.49
NELFEP18615 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
NELFEP18615 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.14■□□□□ 0.49
NELFEP18615 AL441883.1-201ENST00000566170 1045 ntBASIC18.14■□□□□ 0.49
NELFEP18615 NEK4P2-201ENST00000580004 1012 ntBASIC18.14■□□□□ 0.49
NELFEP18615 MIR4674-201ENST00000582457 87 ntBASIC18.14■□□□□ 0.49
NELFEP18615 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.14■□□□□ 0.49
NELFEP18615 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
NELFEP18615 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NELFEP18615 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NELFEP18615 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NELFEP18615 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.14■□□□□ 0.49
NELFEP18615 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NELFEP18615 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
NELFEP18615 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NELFEP18615 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms