Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA12O60330 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA12O60330 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 AC104819.1-201ENST00000504587 486 ntBASIC18.21■□□□□ 0.51
PCDHGA12O60330 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA12O60330 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA12O60330 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGA12O60330 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
PCDHGA12O60330 AC026471.1-201ENST00000564629 3026 ntBASIC18.2■□□□□ 0.5
PCDHGA12O60330 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 AP003733.1-201ENST00000491725 852 ntBASIC18.2■□□□□ 0.5
PCDHGA12O60330 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 MIR3180-4-201ENST00000582223 153 ntBASIC18.2■□□□□ 0.5
PCDHGA12O60330 AC005332.3-201ENST00000589904 676 ntBASIC18.2■□□□□ 0.5
PCDHGA12O60330 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.2■□□□□ 0.5
PCDHGA12O60330 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA12O60330 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA12O60330 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 RCC2P3-201ENST00000418112 1537 ntBASIC18.19■□□□□ 0.5
PCDHGA12O60330 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 AL512353.2-201ENST00000448759 1962 ntBASIC18.19■□□□□ 0.5
PCDHGA12O60330 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 AC079781.3-201ENST00000449110 356 ntBASIC18.19■□□□□ 0.5
PCDHGA12O60330 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 AL662844.1-201ENST00000546340 181 ntBASIC18.19■□□□□ 0.5
PCDHGA12O60330 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 AL390719.2-201ENST00000606993 987 ntBASIC18.19■□□□□ 0.5
PCDHGA12O60330 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA12O60330 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA12O60330 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGA12O60330 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGA12O60330 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms