Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 AC004911.1-201ENST00000416316 871 ntBASIC15.01□□□□□ -0.01
SSSCA1O60232 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.01□□□□□ -0.01
SSSCA1O60232 HLA-A-209ENST00000638375 975 ntBASIC15.01□□□□□ -0.01
SSSCA1O60232 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 AC084018.2-201ENST00000613093 2607 ntBASIC15.01□□□□□ -0.01
SSSCA1O60232 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SSSCA1O60232 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.01□□□□□ -0.01
SSSCA1O60232 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SSSCA1O60232 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SSSCA1O60232 AC108860.2-201ENST00000562760 2183 ntBASIC15□□□□□ -0.01
SSSCA1O60232 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15□□□□□ -0.01
SSSCA1O60232 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15□□□□□ -0.01
SSSCA1O60232 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15□□□□□ -0.01
SSSCA1O60232 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SSSCA1O60232 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SSSCA1O60232 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 NFIC-211ENST00000641145 8399 ntBASIC15□□□□□ -0.01
SSSCA1O60232 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15□□□□□ -0.01
SSSCA1O60232 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SSSCA1O60232 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
SSSCA1O60232 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SSSCA1O60232 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SSSCA1O60232 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.99□□□□□ -0.01
SSSCA1O60232 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.99□□□□□ -0.01
SSSCA1O60232 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms