Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KDELR3O43731 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.62■□□□□ 0.57
KDELR3O43731 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 AP003733.1-201ENST00000491725 852 ntBASIC18.62■□□□□ 0.57
KDELR3O43731 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.62■□□□□ 0.57
KDELR3O43731 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 AP000550.4-202ENST00000639755 178 ntBASIC18.62■□□□□ 0.57
KDELR3O43731 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.62■□□□□ 0.57
KDELR3O43731 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 ESPNP-201ENST00000270691 2015 ntBASIC18.62■□□□□ 0.57
KDELR3O43731 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
KDELR3O43731 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
KDELR3O43731 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.61■□□□□ 0.57
KDELR3O43731 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.61■□□□□ 0.57
KDELR3O43731 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 IER3-202ENST00000376377 1350 ntBASIC18.61■□□□□ 0.57
KDELR3O43731 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.61■□□□□ 0.57
KDELR3O43731 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.61■□□□□ 0.57
KDELR3O43731 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
KDELR3O43731 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.61■□□□□ 0.57
KDELR3O43731 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.61■□□□□ 0.57
KDELR3O43731 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.61■□□□□ 0.57
KDELR3O43731 AC091076.1-201ENST00000610741 619 ntBASIC18.61■□□□□ 0.57
KDELR3O43731 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.61■□□□□ 0.57
KDELR3O43731 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
KDELR3O43731 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
KDELR3O43731 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KDELR3O43731 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 AC113404.2-201ENST00000507884 177 ntBASIC18.6■□□□□ 0.57
KDELR3O43731 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.6■□□□□ 0.57
KDELR3O43731 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 RNF126P1-202ENST00000569893 925 ntBASIC18.6■□□□□ 0.57
KDELR3O43731 AC011498.5-201ENST00000592027 486 ntBASIC18.6■□□□□ 0.57
KDELR3O43731 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
KDELR3O43731 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.6■□□□□ 0.57
KDELR3O43731 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
KDELR3O43731 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KDELR3O43731 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KDELR3O43731 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KDELR3O43731 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KDELR3O43731 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KDELR3O43731 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.59■□□□□ 0.57
KDELR3O43731 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.59■□□□□ 0.57
KDELR3O43731 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
KDELR3O43731 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.59■□□□□ 0.57
KDELR3O43731 IGHGP-201ENST00000390555 1178 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms