Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.65■□□□□ 0.9
CHMP2AO43633 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP2AO43633 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHMP2AO43633 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMP2AO43633 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP2AO43633 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMP2AO43633 AC116407.4-201ENST00000623319 1061 ntBASIC20.65■□□□□ 0.9
CHMP2AO43633 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP2AO43633 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2AO43633 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2AO43633 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CHMP2AO43633 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.64■□□□□ 0.9
CHMP2AO43633 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2AO43633 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP2AO43633 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP2AO43633 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CHMP2AO43633 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP2AO43633 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 AC093458.2-201ENST00000623150 629 ntBASIC20.64■□□□□ 0.89
CHMP2AO43633 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP2AO43633 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP2AO43633 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP2AO43633 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP2AO43633 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP2AO43633 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP2AO43633 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMP2AO43633 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP2AO43633 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHMP2AO43633 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHMP2AO43633 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP2AO43633 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 HCG11-201ENST00000411553 5696 ntBASIC20.62■□□□□ 0.89
CHMP2AO43633 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHMP2AO43633 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 MIR662-201ENST00000384847 95 ntBASIC20.62■□□□□ 0.89
CHMP2AO43633 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP2AO43633 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 RNF126P1-202ENST00000569893 925 ntBASIC20.62■□□□□ 0.89
CHMP2AO43633 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.62■□□□□ 0.89
CHMP2AO43633 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP2AO43633 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP2AO43633 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms